Information for 5-ACGGAGCGCC (Motif 16)

C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G T A C G G T A C A C T G A G T C A G C T A G T C T G A C A C T G A C G T
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.881
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets59.7 +/- 23.9bp
Average Position of motif in Background51.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACGGAGCGCC
-CGGAGC---
 C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGGAGCGCC-----
ANCGCGCGCCCTTNN
 C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACGGAGCGCC--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACGGAGCGCC
---CAGCC--
 C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAGCGCC-----
NNNGGGGCGCCCCCNN
 A C G T C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACGGAGCGCC
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACGGAGCGCC
--AGCGCGCC
 C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACGGAGCGCC--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACGGAGCGCC-
-TTGAGTGSTT
 C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ACGGAGCGCC---
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C T A G C T G A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T