Information for 7-RGGAAGDAARGNKGGT (Motif 10)

C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
Reverse Opposite:
G T C A A G T C G T A C G T C A C G A T T G A C G A T C C A G T A C G T G A C T G T A C C G A T A G C T A G T C G T A C G A T C
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.554
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif9.55%
Number of Background Sequences with motif1424.5
Percentage of Background Sequences with motif2.92%
Average Position of motif in Targets47.6 +/- 21.3bp
Average Position of motif in Background52.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---RGGAAGDAARGNKGGT
GGAAGGAAGGAAGGAAGG-
 A C G T A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGGAAGDAARGNKGGT
AGAAACGAAAGT----
 C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----RGGAAGDAARGNKGGT
AACAAGGAAGTAA-------
 A C G T A C G T A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RGGAAGDAARGNKGGT
-AAAACAAAGG-----
 C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----RGGAAGDAARGNKGGT
TTAAGAGGAAGTTA-------
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RGGAAGDAARGNKGGT
TGGAACAGMA------
 C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RGGAAGDAARGNKGGT
-GGAACAAAGR-----
 C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RGGAAGDAARGNKGGT
AGAGGAA-----------
 A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RGGAAGDAARGNKGGT
AVCAGGAAGT---------
 A C G T A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----RGGAAGDAARGNKGGT
NNNNGGGGGAAGANGG-----
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G T C G A G C T A C A T G C T G A T G C A G T C A C T A G A C T G G C A T C A G T C A T G T C A G C A G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T