Information for 19-TGGTCACCAC (Motif 28)

C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
Reverse Opposite:
C T A G C G A T A C T G A C T G A C G T A T C G C G T A A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.434e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets54.7 +/- 19.8bp
Average Position of motif in Background49.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGTCACCAC
AGGTCA----
 C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGTCACCAC
TGGGGCCCAC
 C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCACCAC-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------TGGTCACCAC----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGTCACCAC
AAGGTCAC---
 A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGGTCACCAC--
GARTGGTCATCGCCC
 A C G T A C G T A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTCACCAC
AGRGGTCA----
 A C G T A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGTCACCAC
TRAGGTCA----
 A C G T A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGGTCACCAC---
--GTCAGCANNTN
 C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C A C G T A C G T A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCACCAC-
SCTGTCARCACC
 A C G T C G A T A C T G A C T G G C A T A T G C C G T A G T A C A G T C C G T A G A T C A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C