Information for 17-CATCAAAGAGBGA (Motif 27)

T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C T G C A A T G C A C G T A T G C A G C T A C G T A C G T C T A G C G T A C G A T A C T G
p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.735
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.4 +/- 28.7bp
Average Position of motif in Background44.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L2/MA0523.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATCAAAGAGBGA
AAAGATCAAAGGAA--
 A C G T A C G T A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATCAAAGAGBGA
ACATCAAAGGNA--
 A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATCAAAGAGBGA
-ATTAAA------
 T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCAAAGAGBGA
ACATCAAAGG----
 A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATCAAAGAGBGA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATCAAAGAGBGA
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CATCAAAGAGBGA
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATCAAAGAGBGA
TCATCAATCA----
 A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATCAAAGAGBGA
ACWTCAAAGG----
 A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CATCAAAGAGBGA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T T G A C C G T A A C G T A G T C C G T A T G C A C T G A A T C G C G T A A T C G A C G T A C T G C T G A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A