Information for 13-GGAGRGAGGTGCG (Motif 19)

A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
Reverse Opposite:
A T G C A C T G A G T C G T C A A G T C A T G C A G C T A G T C A G C T A T G C C A G T A G T C A G T C
p-value:1e-7
log p-value:-1.836e+01
Information Content per bp:1.768
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets43.6 +/- 26.9bp
Average Position of motif in Background43.3 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGRGAGGTGCG
GGGCGGGAAGG---
 A C G T A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGRGAGGTGCG
----GGACGTGC-
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGRGAGGTGCG
GGCGGGAARN---
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGRGAGGTGCG
----RTACGTGC-
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGRGAGGTGCG
GGGCGGGAAGG---
 A C G T A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGRGAGGTGCG
--GGGTACGTGC-
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGRGAGGTGCG--
GGGNGGGGGCGGGGC
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAGRGAGGTGCG--
GGGGGGGGGGGGGGA
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGRGAGGTGCG
GTGGGGGAGGGG--
 A C G T A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAGRGAGGTGCG
-----TACGTGCV
 A C T G A C T G G T C A A T C G C T G A A C T G C T G A T A C G A C T G A C G T A C T G T G A C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C