Information for 15-ATAAACTGTG (Motif 40)

C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
Reverse Opposite:
T A G C G C T A A G T C G T C A A T C G C A G T A C G T C G A T C G T A A C G T
p-value:1e-4
log p-value:-1.073e+01
Information Content per bp:1.781
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif303.8
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets47.4 +/- 19.5bp
Average Position of motif in Background51.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATAAACTGTG-
-NHAACBGYYV
 C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATAAACTGTG
AATAAACAATN
 A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATAAACTGTG
GCTAAACGGT-
 A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATAAACTGTG
GCAATAAAA----
 A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAAACTGTG
GGTAATAAAAA---
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAAACTGTG
CTAATTAA-----
 A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAACTGTG
WWATRTAAACAN--
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATAAACTGTG-
-CCAACTGCCA
 C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATAAACTGTG
NCYAATAAAA----
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATAAACTGTG
GTCATAAAAN---
 A C G T A C G T A C G T C G T A C G A T C G T A C G T A G T C A A T G C C A G T A C T G C G A T A T C G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T