Information for 17-GGTGATTAATGTG (Motif 30)

A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C G T A C G T C G T A C T G A A C G T A G T C C G T A A G T C G T A C
p-value:1e-6
log p-value:-1.439e+01
Information Content per bp:1.947
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 26.5bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGTGATTAATGTG
--TGATTGATGA-
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGTGATTAATGTG-
--TGATTRATGGCY
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTGATTAATGTG
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGTGATTAATGTG
--TGATTTATGGC
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTGATTAATGTG
-NTAATTAATAT-
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTGATTAATGTG
-ATGATKGATGRC
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGTGATTAATGTG-
CNNAGTAATTAATTNNC
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTGATTAATGTG-
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0072.1_Hoxc8/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGTGATTAATGTG
TTGGGGTAATTAACGT-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTGATTAATGTG
GGTGACTCATC--
 A C T G A C T G A C G T A C T G C G T A A G C T A C G T C G T A C G T A A C G T C T A G A C G T A C T G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T