Information for 10-GWCTYRGAGAGSCRAK (Motif 16)

A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
Reverse Opposite:
G T A C A G C T A G C T T A C G T A G C A T G C G C A T A T G C C G A T A G T C G A T C C T A G C G T A C T A G G C A T G T A C
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.644
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif67.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets47.5 +/- 27.7bp
Average Position of motif in Background44.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GWCTYRGAGAGSCRAK
CTACTTGGATACGGAAT
 A C G T A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GWCTYRGAGAGSCRAK
---BTBRAGTGSN---
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GWCTYRGAGAGSCRAK
---CTTGAGTGGCT--
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GWCTYRGAGAGSCRAK
----TTGAGTGSTT--
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GWCTYRGAGAGSCRAK-
GATATTGACAGCTGCGT
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GWCTYRGAGAGSCRAK
---CTYRAGTGSY---
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GWCTYRGAGAGSCRAK
----TTGACAGC----
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GWCTYRGAGAGSCRAK
TTTCCTAGAAAGCA---
 A C G T A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GWCTYRGAGAGSCRAK
AGGTCACGGAGAGGTCA-
 A C G T A C G T A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GWCTYRGAGAGSCRAK
NNNACCGAGAGTNNN-
 A C T G C G T A A G T C C G A T A G T C C T A G A C T G C G T A T A C G C G T A A T C G A T C G A T G C C T G A C T G A A C T G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T