Information for 8-AGCAGRGAGAGAG (Motif 8)

C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G
Reverse Opposite:
A T G C A C G T A G T C A C G T A G T C A C G T G T A C A G C T A G T C C G A T A C T G A G T C A G C T
p-value:1e-11
log p-value:-2.630e+01
Information Content per bp:1.724
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif255.3
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets49.4 +/- 22.8bp
Average Position of motif in Background50.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCAGRGAGAGAG-
--GAAAGTGAAAGT
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCAGRGAGAGAG----
--TTGACCGAGAATTCC
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCAGRGAGAGAG----
--NNNACCGAGAGTNNN
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCAGRGAGAGAG
AGGTGNCAGACAG
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCAGRGAGAGAG---
-AGAAAGTGAAAGTGA
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T A C G T A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCAGRGAGAGAG
CACAGCAGGGGG----
 A C G T A C G T A C G T C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGCAGRGAGAGAG
---GGCGGGAARN
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCAGRGAGAGAG-
----GGGCGGGACC
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCAGRGAGAGAG--
----GGGCGGGAAGG
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGCAGRGAGAGAG--
---TGAGTGACAGSC
 C T G A T C A G G T A C G C T A C T A G T C G A C A T G G T C A C T A G C G T A C T A G G T C A A T C G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C