Information for 6-ACACTAGATGGAA (Motif 5)

C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
Reverse Opposite:
G A C T C G A T A G T C T A G C G T C A A C G T A G T C A C G T G C T A A C T G A C G T T C A G A G C T
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.709
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif43.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.0 +/- 17.2bp
Average Position of motif in Background48.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACACTAGATGGAA
CCACTTGAA----
 C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------ACACTAGATGGAA
TNNAGAACAATANATNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACACTAGATGGAA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------ACACTAGATGGAA
TCACGGAACAATAGGTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACACTAGATGGAA
NSCACTYVAV----
 A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACACTAGATGGAA
MRSCACTYAA-----
 A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------ACACTAGATGGAA
NNNNNGAACAATTGANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACACTAGATGGAA
AAGATAAGATAACA
 A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACACTAGATGGAA
TAGTGAACAATAGATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACACTAGATGGAA
RSCACTYRAG----
 A C G T C T G A A G T C C G T A G T A C C A G T G T C A C T A G C G T A A C G T A C T G T A C G C G T A C T G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T