Information for 19-ACTARSTGMMCGKMCA (Motif 39)

C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T A C A T G C C T A G A C T G A C G T A G T C C G T A A T C G A G C T A C G T C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 25.2bp
Average Position of motif in Background42.9 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTARSTGMMCGKMCA
CGACCAACTGCCATGC--
 A C G T A C G T C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACTARSTGMMCGKMCA
-CTAATKGV-------
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACTARSTGMMCGKMCA
-TTAAGTGC-------
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------ACTARSTGMMCGKMCA
NNNTGAACTCNNTGACCTCN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ACTARSTGMMCGKMCA
CGACCAACTGCCGTG---
 A C G T A C G T C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ACTARSTGMMCGKMCA---
-----ATGCCCGGGCATGT
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---ACTARSTGMMCGKMCA
TGAACCCGATGACCC----
 A C G T A C G T A C G T C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:ACTARSTGMMCGKMCA
-TTAAGTGGN------
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:ACTARSTGMMCGKMCA
-CCAACTGCCA-----
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:ACTARSTGMMCGKMCA
-TTAAGTGGT------
 C G T A A G T C C G A T G T C A C T G A A T G C A C G T A C T G G T C A G T A C A G T C A T C G A C T G G T A C A G T C C G T A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T