p-value: | 1e-10 |
log p-value: | -2.364e+01 |
Information Content per bp: | 1.636 |
Number of Target Sequences with motif | 51.0 |
Percentage of Target Sequences with motif | 7.05% |
Number of Background Sequences with motif | 1177.5 |
Percentage of Background Sequences with motif | 2.47% |
Average Position of motif in Targets | 51.2 +/- 26.1bp |
Average Position of motif in Background | 51.4 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0049.1_Hoxa2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA------ AAGGTAATTAGCTCAT |
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PH0052.1_Hoxa5/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA------ ACGGTAATTAGCTCAG |
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MEOX2/MA0706.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA-- --AGTAATTAAC |
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Hoxd3/MA0912.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGGTAATDA------ ANGNTAATTANCNCAN |
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PH0079.1_Hoxd3/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGGTAATDA------ ANGNTAATTANCNCAN |
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MEOX1/MA0661.1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA-- --GCTAATTAAC |
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PH0022.1_Dlx3/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGGTAATDA------ NNNGGTAATTATNGNGN |
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Hoxb5/MA0904.1/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA------ ACGGTAATTAGCTCAT |
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PH0060.1_Hoxb5/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGGTAATDA------ ACGGTAATTAGCTCAT |
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PH0072.1_Hoxc8/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGGTAATDA---- TTGGGGTAATTAACGT |
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