Information for 3-CCACAGGCCTKTSGNG (Motif 5)

T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A T G A C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A T C G A T C G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.796
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 24.9bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCACAGGCCTKTSGNG
--CNAGGCCT------
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACAGGCCTKTSGNG
--CTAGGCCT------
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCACAGGCCTKTSGNG-
---CAGGCCNNGGCCNN
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCACAGGCCTKTSGNG
-CAAAGGCGTGGCCAG
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCACAGGCCTKTSGNG
-CACAGN---------
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCACAGGCCTKTSGNG
NNACTTGCCTT-----
 T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGCCTKTSGNG
AAACCACAGAN--------
 A C G T A C G T A C G T T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCCTKTSGNG
CGCCTCAGGCA-------
 A C G T A C G T T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCACAGGCCTKTSGNG
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCCTKTSGNG
AGCCTCAGGCA-------
 A C G T A C G T T A G C A T G C C G T A G T A C C G T A A C T G A C T G A G T C A G T C A C G T A C T G G C A T A T C G A C T G A C G T A T C G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T