Information for 1-GAGGGRCRCWMCG (Motif 3)

A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 18.9bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGRCRCWMCG
NRRGGGTCTT----
 A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGGRCRCWMCG
GTGGGCCCCA---
 A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGGRCRCWMCG--
TTGGGGGCGCCCCTAG
 A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGRCRCWMCG
GGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGGRCRCWMCG
GGAGGGGGAA----
 A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGRCRCWMCG
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGRCRCWMCG
GGGGNGGGGC------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GAGGGRCRCWMCG
TGCGGAGTGGGACTGG-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGGGRCRCWMCG---
--GGGGCCCAAGGGGG
 A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GAGGGRCRCWMCG
TGGGGAAGGGCM-----
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C T A G A G T C C T A G A G T C C G A T G T C A A G T C A C T G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T