Information for 13-GCGGTGTGAG (Motif 40)

C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
Reverse Opposite:
G T A C C G A T G T A C C G T A G T A C C G T A A G T C A G T C A C T G A G T C
p-value:1e-4
log p-value:-1.037e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif127.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets52.6 +/- 26.7bp
Average Position of motif in Background47.2 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCGGTGTGAG
-AGGTGTGA-
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCGGTGTGAG
-AGGTGTGA-
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCGGTGTGAG
-AGGTGTGA-
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTGAG
TTGCGGTTT---
 A C G T A C G T C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCGGTGTGAG
-AGGTGTGA-
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGGTGTGAG
-AGGTGTGA-
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTGAG
BRRCVGTTDN--
 A C G T A C G T C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTGTGAG
TTTGCGGTTT---
 A C G T A C G T A C G T C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGTGTGAG---
AAGGTGTGAAAAT
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGTGTGAG
AAGGTGTGAA
 C T A G A G T C C T A G A C T G C G A T A C T G C G A T A C T G C G T A A C T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A