Information for 18-CGCDGCKCTGCGM (Motif 37)

A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
Reverse Opposite:
C A T G A G T C C A T G A G T C C G T A T A C G G T A C C T A G A G T C G T C A T A C G T G A C T C A G
p-value:1e-5
log p-value:-1.310e+01
Information Content per bp:1.652
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif472.9
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets55.8 +/- 21.2bp
Average Position of motif in Background49.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCDGCKCTGCGM---
--NNGCNCTGCGCGGC
 A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCDGCKCTGCGM----
AATCGCACTGCATTCCG
 A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCDGCKCTGCGM
CCTGCTGAGH-----
 A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGCDGCKCTGCGM
-GCTGTG------
 A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CGCDGCKCTGCGM--
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CGCDGCKCTGCGM
NNTCCTGCTGTGNNN---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGCDGCKCTGCGM
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGCDGCKCTGCGM
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CGCDGCKCTGCGM
--CGCAGCTGCG-
 A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGCDGCKCTGCGM
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C A G T A C T G G A T C C A T G A G T C C G A T C T A G G A T C C T A G G T A C
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A