Information for 19-TCTCTCTCTCTCACAC (Motif 33)

G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
Reverse Opposite:
T A C G C G A T C T A G G C A T T C A G C G T A T C A G C G T A C T A G C G T A A C T G C T G A A T C G C T G A T A C G C T G A
p-value:1e-6
log p-value:-1.531e+01
Information Content per bp:1.669
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif408.2
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets42.7 +/- 24.8bp
Average Position of motif in Background49.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCTCTCTCTCTCACAC
---CTGTCTGTCACCT
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCACAC
ACTTTCACTTTC----
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTCTCTCACAC
TCACTTTCACTTTCN---
 A C G T A C G T G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCTCTCTCTCTCACAC
----TGTCTGDCACCT
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCACAC
ACTTTCACTTTC----
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTCTCTCACAC
ACCACTCTCGGTCAC--
 A C G T G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTCTCTCACAC
GSCTGTCACTCA-----
 A C G T G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCACAC
ASTTTCASTTYC----
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCTCTCTCTCTCACAC-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCACAC
NCTGTCAATCAN----
 G A C T A G T C G A C T A T G C G A C T T A G C C G A T A G T C C G A T A G T C G C A T A G T C C G T A G A T C G C T A A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T