Information for 3-CCCGCCWCMCTGA (Motif 12)

A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G A C T G A C T G G C A T T A C G A C T G G T A C A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.822
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.0 +/- 19.6bp
Average Position of motif in Background41.1 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCWCMCTGA
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCWCMCTGA
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCWCMCTGA
GCCCCGCCCCC----
 A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCCWCMCTGA
TTTCCCGCCMAV----
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCWCMCTGA
GGCCCCGCCCCC----
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCWCMCTGA
TTCCCGCCWG-----
 A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCWCMCTGA
NNTTCCCGCCC------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCWCMCTGA
NCTTCCCGCCC------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCWCMCTGA
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCWCMCTGA
VDTTTCCCGCCA------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G G T A C A T G C C G T A A G T C T G A C A G T C C G A T A C T G C T G A
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T