Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-38 | -8.855e+01 | 0.0000 | 62.0 | 7.57% | 386.8 | 0.80% | motif file (matrix) |
svg |
2 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-33 | -7.651e+01 | 0.0000 | 67.0 | 8.18% | 576.2 | 1.20% | motif file (matrix) |
svg |
3 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-29 | -6.873e+01 | 0.0000 | 85.0 | 10.38% | 1089.7 | 2.26% | motif file (matrix) |
svg |
4 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-29 | -6.853e+01 | 0.0000 | 91.0 | 11.11% | 1251.7 | 2.60% | motif file (matrix) |
svg |
5 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-29 | -6.825e+01 | 0.0000 | 77.0 | 9.40% | 896.4 | 1.86% | motif file (matrix) |
svg |
6 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-28 | -6.608e+01 | 0.0000 | 84.0 | 10.26% | 1106.6 | 2.30% | motif file (matrix) |
svg |
7 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-27 | -6.342e+01 | 0.0000 | 90.0 | 10.99% | 1316.2 | 2.73% | motif file (matrix) |
svg |
8 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-27 | -6.341e+01 | 0.0000 | 94.0 | 11.48% | 1430.8 | 2.97% | motif file (matrix) |
svg |
9 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-24 | -5.618e+01 | 0.0000 | 137.0 | 16.73% | 3034.3 | 6.30% | motif file (matrix) |
svg |
10 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-22 | -5.102e+01 | 0.0000 | 249.0 | 30.40% | 7959.7 | 16.53% | motif file (matrix) |
svg |
11 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-18 | -4.302e+01 | 0.0000 | 30.0 | 3.66% | 190.7 | 0.40% | motif file (matrix) |
svg |
12 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-14 | -3.401e+01 | 0.0000 | 33.0 | 4.03% | 330.1 | 0.69% | motif file (matrix) |
svg |
13 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-14 | -3.278e+01 | 0.0000 | 155.0 | 18.93% | 4783.1 | 9.93% | motif file (matrix) |
svg |
14 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-12 | -2.922e+01 | 0.0000 | 115.0 | 14.04% | 3267.2 | 6.79% | motif file (matrix) |
svg |
15 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-11 | -2.595e+01 | 0.0000 | 55.0 | 6.72% | 1112.9 | 2.31% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-10 | -2.520e+01 | 0.0000 | 31.0 | 3.79% | 406.2 | 0.84% | motif file (matrix) |
svg |
17 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.910e+01 | 0.0000 | 142.0 | 17.34% | 5121.5 | 10.64% | motif file (matrix) |
svg |
18 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-7 | -1.682e+01 | 0.0000 | 66.0 | 8.06% | 1885.5 | 3.92% | motif file (matrix) |
svg |
19 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-7 | -1.648e+01 | 0.0000 | 57.0 | 6.96% | 1539.4 | 3.20% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-6 | -1.520e+01 | 0.0000 | 59.0 | 7.20% | 1683.6 | 3.50% | motif file (matrix) |
svg |
21 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-6 | -1.503e+01 | 0.0000 | 33.0 | 4.03% | 701.6 | 1.46% | motif file (matrix) |
svg |
22 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-6 | -1.477e+01 | 0.0000 | 38.0 | 4.64% | 887.8 | 1.84% | motif file (matrix) |
svg |
23 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.461e+01 | 0.0000 | 38.0 | 4.64% | 893.9 | 1.86% | motif file (matrix) |
svg |
24 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-5 | -1.313e+01 | 0.0000 | 71.0 | 8.67% | 2317.5 | 4.81% | motif file (matrix) |
svg |
25 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.266e+01 | 0.0000 | 47.0 | 5.74% | 1326.2 | 2.75% | motif file (matrix) |
svg |
26 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.243e+01 | 0.0001 | 29.0 | 3.54% | 649.0 | 1.35% | motif file (matrix) |
svg |
27 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.205e+01 | 0.0001 | 67.0 | 8.18% | 2214.3 | 4.60% | motif file (matrix) |
svg |
28 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-5 | -1.179e+01 | 0.0001 | 56.0 | 6.84% | 1751.7 | 3.64% | motif file (matrix) |
svg |
29 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -1.140e+01 | 0.0001 | 70.0 | 8.55% | 2395.8 | 4.98% | motif file (matrix) |
svg |
30 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-4 | -1.113e+01 | 0.0002 | 64.0 | 7.81% | 2146.5 | 4.46% | motif file (matrix) |
svg |
31 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -1.099e+01 | 0.0002 | 9.0 | 1.10% | 83.1 | 0.17% | motif file (matrix) |
svg |
32 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-4 | -1.057e+01 | 0.0003 | 52.0 | 6.35% | 1656.3 | 3.44% | motif file (matrix) |
svg |
33 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.043e+01 | 0.0003 | 24.0 | 2.93% | 540.2 | 1.12% | motif file (matrix) |
svg |
34 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-4 | -1.005e+01 | 0.0005 | 12.0 | 1.47% | 168.6 | 0.35% | motif file (matrix) |
svg |
35 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.900e+00 | 0.0005 | 42.0 | 5.13% | 1270.9 | 2.64% | motif file (matrix) |
svg |
36 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -9.315e+00 | 0.0009 | 59.0 | 7.20% | 2056.4 | 4.27% | motif file (matrix) |
svg |
37 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.311e+00 | 0.0009 | 241.0 | 29.43% | 11398.6 | 23.67% | motif file (matrix) |
svg |
38 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -9.160e+00 | 0.0010 | 27.0 | 3.30% | 702.0 | 1.46% | motif file (matrix) |
svg |
39 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -9.145e+00 | 0.0010 | 72.0 | 8.79% | 2673.6 | 5.55% | motif file (matrix) |
svg |
40 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -9.021e+00 | 0.0011 | 20.0 | 2.44% | 447.8 | 0.93% | motif file (matrix) |
svg |
41 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.971e+00 | 0.0011 | 84.0 | 10.26% | 3263.0 | 6.78% | motif file (matrix) |
svg |
42 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -8.906e+00 | 0.0012 | 57.0 | 6.96% | 1997.9 | 4.15% | motif file (matrix) |
svg |
43 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -8.331e+00 | 0.0020 | 42.0 | 5.13% | 1368.9 | 2.84% | motif file (matrix) |
svg |
44 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -8.327e+00 | 0.0020 | 85.0 | 10.38% | 3379.9 | 7.02% | motif file (matrix) |
svg |
45 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.971e+00 | 0.0028 | 23.0 | 2.81% | 599.6 | 1.25% | motif file (matrix) |
svg |
46 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.909e+00 | 0.0029 | 42.0 | 5.13% | 1397.7 | 2.90% | motif file (matrix) |
svg |
47 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.813e+00 | 0.0031 | 23.0 | 2.81% | 606.3 | 1.26% | motif file (matrix) |
svg |
48 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.723e+00 | 0.0034 | 19.0 | 2.32% | 458.4 | 0.95% | motif file (matrix) |
svg |
49 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.654e+00 | 0.0035 | 176.0 | 21.49% | 8169.1 | 16.97% | motif file (matrix) |
svg |
50 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-3 | -7.425e+00 | 0.0043 | 44.0 | 5.37% | 1522.1 | 3.16% | motif file (matrix) |
svg |
51 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.404e+00 | 0.0043 | 53.0 | 6.47% | 1937.1 | 4.02% | motif file (matrix) |
svg |
52 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.351e+00 | 0.0045 | 98.0 | 11.97% | 4141.1 | 8.60% | motif file (matrix) |
svg |
53 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.867e+00 | 0.0072 | 63.0 | 7.69% | 2463.8 | 5.12% | motif file (matrix) |
svg |
54 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.829e+00 | 0.0073 | 37.0 | 4.52% | 1252.6 | 2.60% | motif file (matrix) |
svg |
55 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.759e+00 | 0.0077 | 7.0 | 0.85% | 92.2 | 0.19% | motif file (matrix) |
svg |
56 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.414e+00 | 0.0106 | 30.0 | 3.66% | 972.3 | 2.02% | motif file (matrix) |
svg |
57 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.346e+00 | 0.0112 | 7.0 | 0.85% | 99.5 | 0.21% | motif file (matrix) |
svg |
58 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.277e+00 | 0.0118 | 49.0 | 5.98% | 1851.1 | 3.84% | motif file (matrix) |
svg |
59 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -6.161e+00 | 0.0130 | 16.0 | 1.95% | 408.8 | 0.85% | motif file (matrix) |
svg |
60 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -6.022e+00 | 0.0147 | 52.0 | 6.35% | 2019.0 | 4.19% | motif file (matrix) |
svg |
61 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -5.953e+00 | 0.0155 | 58.0 | 7.08% | 2317.6 | 4.81% | motif file (matrix) |
svg |
62 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.825e+00 | 0.0171 | 32.0 | 3.91% | 1102.2 | 2.29% | motif file (matrix) |
svg |
63 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.825e+00 | 0.0171 | 32.0 | 3.91% | 1102.5 | 2.29% | motif file (matrix) |
svg |
64 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.592e+00 | 0.0212 | 55.0 | 6.72% | 2210.1 | 4.59% | motif file (matrix) |
svg |
65 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.349e+00 | 0.0266 | 66.0 | 8.06% | 2785.7 | 5.79% | motif file (matrix) |
svg |
66 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -5.216e+00 | 0.0299 | 39.0 | 4.76% | 1477.8 | 3.07% | motif file (matrix) |
svg |
67 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -5.136e+00 | 0.0319 | 52.0 | 6.35% | 2114.2 | 4.39% | motif file (matrix) |
svg |
68 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.094e+00 | 0.0328 | 16.0 | 1.95% | 457.0 | 0.95% | motif file (matrix) |
svg |
69 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.944e+00 | 0.0376 | 40.0 | 4.88% | 1552.0 | 3.22% | motif file (matrix) |
svg |
70 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -4.938e+00 | 0.0376 | 36.0 | 4.40% | 1361.4 | 2.83% | motif file (matrix) |
svg |
71 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -4.920e+00 | 0.0376 | 49.0 | 5.98% | 1991.7 | 4.14% | motif file (matrix) |
svg |
72 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -4.902e+00 | 0.0376 | 63.0 | 7.69% | 2692.1 | 5.59% | motif file (matrix) |
svg |