Information for 12-TGCWTTWACTMCT (Motif 18)

A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.886
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.8 +/- 24.1bp
Average Position of motif in Background51.1 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
ANNCATTAATTGCTNGN
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
ANNCATTAATTGCTNGN
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCWTTWACTMCT
---ATTAACACCT
 A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
ANNATTTTACGACNTNA
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
NNNATTTTACGACNNTN
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCWTTWACTMCT
---GTTAACTAGN
 A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
ATTNNTTAATTGCTTGT
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCWTTWACTMCT---
ATTNNTTAATTGCTTGT
 A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCWTTWACTMCT
NNNNTGAATTCANNNC-
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCWTTWACTMCT
--NTTTTACGACC
 A C G T A C T G T A G C C G A T A C G T A C G T C G A T G T C A A G T C A C G T T G A C A G T C A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C