Information for 9-CCTGAATGAATTA (Motif 13)

T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A
Reverse Opposite:
A G C T C T G A G T C A C G A T A C G T A G T C C G T A C G A T A G C T A G T C C G T A C A T G A C T G
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.669
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.2 +/- 25.5bp
Average Position of motif in Background53.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCTGAATGAATTA-
ACTATGAATGAATGAT
 A C G T A C G T T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTGAATGAATTA---
NNNTATTGAATTGNNN
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAATGAATTA
NANTTCATTGAATTA
 A C G T A C G T T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PH0146.1_Pou3f1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTGAATGAATTA---
NANTTAATTAATTANNN
 A C G T T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCTGAATGAATTA
--TGATTAAATTA
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCTGAATGAATTA
---TAATCAATTA
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PH0149.1_Pou3f4/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTGAATGAATTA----
AATTAATTAATTAATTC
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTGAATGAATTA---
GANTTAATTAATTANNN
 A C G T T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

Lhx3/MA0135.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTGAATGAATTA---
---AAATTAATTAATC
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGAATGAATTA--
NWTGATTRGRTTAWN
 T A G C G T A C C G A T C T A G T C G A C G T A C G A T T A C G G T C A G C T A C A G T A G C T T C G A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C