Information for 16-GGGTTTAAAT (Motif 38)

A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.271e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 39.3bp
Average Position of motif in Background32.3 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GGGTTTAAAT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGGTTTAAAT-
--ATTTGAATT
 A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GGGTTTAAAT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTAAAT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTAAAT--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTAAAT--
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTAAAT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTAAAT
CGGTTTCAAA-
 A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGTTTAAAT---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGTTTAAAT---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T