Information for 17-CCCTGCATTCTGTGAT (Motif 25)

A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
Reverse Opposite:
C T G A A C G T A T G C C G T A A G T C C T G A A T C G C G T A C T G A C G A T A C T G A G T C C G T A A C T G A T C G A T C G
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 25.8bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT
CAATGCATTGTGGGTA
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCCTGCATTCTGTGAT
AATCGCACTGCATTCCG----
 A C G T A C G T A C G T A C G T A C G T A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT
-NNNCCATTGTGTNAN
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT
GYCTGGYYTNTGTCA-
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCCTGCATTCTGTGAT
-----CTTTGT-----
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT-
-ANTCCTTTGTCTNNNN
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT-
--NNTCCTGCTGTGNNN
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCCTGCATTCTGTGAT
-----CCTGCTGAGH-
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT--
-------TGCTGTGATTT
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCCTGCATTCTGTGAT---
---------CNGTGATTTN
 A T G C A T G C G T A C A C G T T C A G A G T C C G T A A G C T A C G T A T G C A G C T A C T G C G A T A T C G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G