Information for 10-SWGGCTGGAGAKGTCT (Motif 14)

A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
Reverse Opposite:
C G T A A C T G C G T A G T A C G T A C A C G T A G T C C G A T A G T C A G T C C G T A A C T G A G T C A G T C G C T A T A C G
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 25.9bp
Average Position of motif in Background75.3 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT
-GGGCGGGAAGG----
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT
-GGGCGGGAAGG----
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SWGGCTGGAGAKGTCT
-TGGCGGGAAAHB---
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT
TWGTCTGV--------
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT
--GGCGGGAARN----
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:SWGGCTGGAGAKGTCT
----CTTGAGTGGCT-
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT----
---GACAGAGATATCAGTGT
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----SWGGCTGGAGAKGTCT
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:SWGGCTGGAGAKGTCT
--NGCTN---------
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:SWGGCTGGAGAKGTCT
----BTBRAGTGSN--
 A T G C C G A T C T A G C T A G A G T C A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G A T A G T C G A C T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T