Information for 8-ACTAAYTCCACTC (Motif 13)

G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C
Reverse Opposite:
A C T G C G T A C A T G C G A T A C T G A C T G T C G A C T G A A C G T A C G T T G C A C T A G C A G T
p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.711
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.3 +/- 28.8bp
Average Position of motif in Background53.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACTAAYTCCACTC----
-NNAGTCCCACTCNNNN
 G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T A C G T A C G T A C G T
A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACTAAYTCCACTC
--TAATCCCN---
 G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTAAYTCCACTC-
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTAAYTCCACTC-
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTAAYTCCACTC-
GGCAAAAGTCCAATAA
 A C G T A C G T G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTAAYTCCACTC
CTTAATCCC----
 G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTAAYTCCACTC-
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ACTAAYTCCACTC
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACTAAYTCCACTC
-----ATCCAC--
 G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ACTAAYTCCACTC---
------NSCACTYVAV
 G T C A G A T C A C G T G T C A C G T A A G C T A G C T A G T C A G T C G C T A G T A C A C G T T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G