Information for 7-GAGGGCGCCTGCG (Motif 11)

A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G A G T C T A G C A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.415e+01
Information Content per bp:1.899
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.0 +/- 26.8bp
Average Position of motif in Background63.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:GAGGGCGCCTGCG--
----GCGCCTGCGCA
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GAGGGCGCCTGCG---
----GCGCATGCGCAG
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GAGGGCGCCTGCG-
--GTGCGCATGCGC
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGGGCGCCTGCG
-AGCGCGCC----
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGGGCGCCTGCG-
--SNGCACCTGCHS
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCGCCTGCG-
NTCGCGCGCCTTNNN
 A C G T A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCCTGCG-
NNNGGGGCGCCCCCNN
 A C G T A C G T A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCGCCTGCG-
ANCGCGCGCCCTTNN
 A C G T A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGGGCGCCTGCG
---CGCACCTGCT
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGGGCGCCTGCG
---NNCACCTGNN
 A T C G C G T A A C T G A T C G A C T G A G T C A C T G A G T C G T A C A C G T A C T G A G T C C T A G
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A