Information for 5-AATGGCAGAAAAGAAT (Motif 5)

C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
Reverse Opposite:
G T C A A C G T A C G T A G T C C G A T C G A T A C G T C A G T A T G C C G A T A C T G A G T C A G T C G T C A A G C T A C G T
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 24.3bp
Average Position of motif in Background61.2 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGAAAAGAAT
CAATTGCAAAAATAT--
 A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATGGCAGAAAAGAAT
TAATGGCGGNC------
 A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGAAAAGAAT---
NANTGGAAAAANTGAGTCAN
 A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AATGGCAGAAAAGAAT
-TTGGCA---------
 C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AATGGCAGAAAAGAAT
NTTGGCANN-------
 C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AATGGCAGAAAAGAAT
-ATTGCACAATA----
 C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AATGGCAGAAAAGAAT
TGATTGGCTANN------
 A C G T A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AATGGCAGAAAAGAAT
CAAGATGGCGGC-------
 A C G T A C G T A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AATGGCAGAAAAGAAT
GTTAATGGCC---------
 A C G T A C G T A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AATGGCAGAAAAGAAT
CAATCACTGGCAGAAT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T A C T G A C T G A G T C G C T A T A C G G T C A C G T A C G T A C G T A A C T G C G T A G T C A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T