Information for 20-TCTCTCTCTCTCT (Motif 28)

G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
Reverse Opposite:
C G T A T C A G C T G A C T A G C T G A T A C G C T G A C T A G C T G A T A C G C T G A T C A G C T G A
p-value:1e-4
log p-value:-1.068e+01
Information Content per bp:1.630
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif421.1
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets43.2 +/- 22.6bp
Average Position of motif in Background51.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTCTCTCT
TCACTTTCACTTTCN
 A C G T A C G T G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCT
ACTTTCACTTTC-
 G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCT
ACTTTCACTTTC-
 G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TCTCTCTCTCTCT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTCTCT
ASTTTCASTTYC-
 G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTCTCTCT-
ACCACTCTCGGTCAC
 A C G T G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTCTCTCTCT
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCTCTCTCTCTCT-
-CTGTCTGTCACCT
 G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTCTCTCT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCTCTCTCTCTCT
AGTTTCAGTTTC-
 G A C T A G T C G A C T A T G C G A C T A G T C G A C T A T G C G A C T G A T C G A C T A G T C G A C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T