p-value: | 1e-17 |
log p-value: | -3.925e+01 |
Information Content per bp: | 1.777 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.44% |
Number of Background Sequences with motif | 4.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.8 +/- 30.8bp |
Average Position of motif in Background | 47.4 +/- 24.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCYATGAAATTTG AGAGCCATAAAATTCG |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCYATGAAATTTG- ACGGCCATAAAATTAAT |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCYATGAAATTTG AAAGGTAATAAAATTT- |
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CDX2/MA0465.1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCYATGAAATTTG AAGCCATAAAA---- |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCYATGAAATTTG GTCATAAAAN--- |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCYATGAAATTTG NGCAATTAAA---- |
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PH0012.1_Cdx1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCYATGAAATTTG TAAGGTAATAAAATTA- |
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Hoxd9/MA0913.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCYATGAAATTTG GCAATAAAAA--- |
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PH0075.1_Hoxd10/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCYATGAAATTTG- AATGCAATAAAATTTAT |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCYATGAAATTTG GGTAATAAAAA--- |
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