Information for 14-GGGRTTRGGWKGG (Motif 19)

A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C C G A T A G T C A G T C A G C T C G T A C G T A A G C T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 24.2bp
Average Position of motif in Background58.2 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGRTTRGGWKGG
GGGATTANN----
 A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTTRGGWKGG
NNGGATTAGN----
 A C G T A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGRTTRGGWKGG-----
-GTATTGGGTGGGTAATT
 A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGRTTRGGWKGG
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTTRGGWKGG
NGGGATTA------
 A C G T A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTTRGGWKGG
VRGGATTARN----
 A C G T A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGRTTRGGWKGG
-GGATTAGC----
 A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGRTTRGGWKGG
GNGGATTAGN----
 A C G T A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGRTTRGGWKGG
RGGATTAR-----
 A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGRTTRGGWKGG
GGGATTAA-----
 A C T G A C T G A C T G C T G A A C G T A C G T C T G A A C T G A C T G C G T A A C T G A C T G A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T