Information for 9-AGACAGCAGVGGGAGA (Motif 14)

C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
Reverse Opposite:
A G C T A G T C G A C T G T A C A T G C A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A G C T A T G C A C G T
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.709
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.1 +/- 17.2bp
Average Position of motif in Background55.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGACAGCAGVGGGAGA
-CACAGCAGGGGG---
 C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCAGVGGGAGA
TGAGTCAGCA--------
 A C G T A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AGACAGCAGVGGGAGA
CAAATCCAGACATCACA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGACAGCAGVGGGAGA
-CACAGN---------
 C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCAGVGGGAGA
CCAGACAG----------
 A C G T A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGACAGCAGVGGGAGA
-GACAGCTGCAG----
 C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGACAGCAGVGGGAGA
-AACAGCTGCAG----
 C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGACAGCAGVGGGAGA
CCACACAGCAGGAGA---
 A C G T A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGACAGCAGVGGGAGA
TTGACAGC---------
 A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.53
Offset:-9
Orientation:reverse strand
Alignment:---------AGACAGCAGVGGGAGA
TGAATTCCTAGAAAGCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C T G A G T A C C G T A A C T G T A G C C G T A C T A G T C G A A T C G A T C G A C T G C G T A T C A G T C G A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T