Information for 4-AAGGCGTTAC (Motif 11)

C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A A G T C C T A G A G T C G T A C A C G T A C G T
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.863
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.0 +/- 23.0bp
Average Position of motif in Background49.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGTTAC---
CAAAGGCGTGGCCAG
 A C G T A C G T C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTGA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTGA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGCGTTAC
AAGGTGTKAA
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGCGTTAC-
AAGGTGTGAAA
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTGA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTCA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTGA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGCGTTAC
-AGGTGTGA-
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGGCGTTAC
AAGGTGTGAA
 C G T A G T C A A C T G A C T G G A T C A C T G A C G T A C G T T G C A A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A