Information for 2-TGTGTATGTGGAT (Motif 6)

A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T G T A C A G T C C G T A A G T C G T C A A C G T G T C A A G T C C G T A A G T C C G T A
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 21.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGTGTATGTGGAT----
------TGTGGATTNNN
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGTGTATGTGGAT---
----NNTGTGGATTSS
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTATGTGGAT-
AYATGYATATGCATR
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TGTGTATGTGGAT
-------GTGGAT
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTATGTGGAT
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGTGTATGTGGAT-
----NNTGTGGTTT
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTGTATGTGGAT--
---NNHTGTGGTTWN
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGTGTATGTGGAT-
---GTCTGTGGTTT
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTGTATGTGGAT
TGTTTATTT----
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTATGTGGAT---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G