Information for 21-TTATGATCTTACT (Motif 39)

A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
Reverse Opposite:
C G T A C A T G C G A T T G C A C G T A A C T G G T C A C A G T A G T C C G T A A C G T C G T A G T C A
p-value:1e-3
log p-value:-8.869e+00
Information Content per bp:1.746
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.1 +/- 21.4bp
Average Position of motif in Background51.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATGATCTTACT-
CTTTAAGTACTTAATG
 A C G T A C G T A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTATGATCTTACT-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTATGATCTTACT
NTAATGAGCT----
 A C G T A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTATGATCTTACT
---TGACCTTGAT
 A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTATGATCTTACT
--GTGACCTT---
 A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTATGATCTTACT
GACGATAATGAGCTTGC-
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTATGATCTTACT
--ATGACCTTGA-
 A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTATGATCTTACT
AAACATAATGAGGTTGC-
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTATGATCTTACT
-NATGACCTTGA-
 A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTATGATCTTACT
---TGACCTYA--
 A C G T G A C T C G T A C G A T A C T G G C T A A C G T A G T C A C G T A C G T G C T A G A T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T