Information for 17-GTTAGTTATG (Motif 35)

C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
Reverse Opposite:
A G T C C T G A A C G T G T C A C G T A A G T C A C G T G T C A C G T A A G T C
p-value:1e-5
log p-value:-1.200e+01
Information Content per bp:1.827
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.7 +/- 27.5bp
Average Position of motif in Background55.0 +/- 41.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTTAGTTATG
ACTAGTTAAC
 C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGTTATG--
NNAATTAGTCACGGT
 A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTAGTTATG
ATGAGTCAT-
 C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGTTATG
GATGAGTCATN
 A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTTAGTTATG
NNATGASTCATH
 A C G T A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTAGTTATG---
NNCTNAATTATGANN
 A C G T A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTAGTTATG---
NTGATTTATGGCC
 C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G A C G T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTAGTTATG
DATGASTCAT-
 A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTTAGTTATG
RATGASTCAT-
 A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTTAGTTATG
GGTGACTCATC
 A C G T C T A G A C G T A C G T C G T A A C T G A C G T A C G T G T C A A G C T C T A G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C