Information for 9-AGGGGCCAGT (Motif 30)

C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
Reverse Opposite:
G C T A A G T C A G C T A C T G A C T G A T G C A T G C G T A C A G T C A C G T
p-value:1e-5
log p-value:-1.381e+01
Information Content per bp:1.852
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif248.6
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets54.4 +/- 28.4bp
Average Position of motif in Background50.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGGGGCCAGT---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGGGCCAGT
AGRGGTCA--
 C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGGGCCAGT---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGGGCCAGT
TGTCAGGGGGCG--
 A C G T A C G T A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCCAGT---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCCAGT---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGGCCAGT
AGGTGTCA--
 C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGGCCAGT---
AGGTGNCAGACAG
 C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGGGCCAGT
GGAGGGGGAA--
 A C G T A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCCAGT
CAAAGGTCAG-
 A C G T C G T A A C T G C A T G A T C G A T C G T G A C A G T C C T G A A C T G C G A T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T