Information for 16-CTCATGGGAAGCACAT (Motif 28)

A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T G T A C A G T C A G T C C T G A A C G T C T A G C G T A A C T G
p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 20.5bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCATGGGAAGCACAT-
-----AGGAAACAGCTG
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CTCATGGGAAGCACAT--
--------AAGCACATGG
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTCATGGGAAGCACAT
------NGAAGC----
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTCATGGGAAGCACAT------
------CGAAGCACACAAAATA
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCATGGGAAGCACAT
--CSTGGGAAAD----
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCATGGGAAGCACAT--
YTAATTRAWWCCAGATGT
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCATGGGAAGCACAT---
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTCATGGGAAGCACAT-
-------AAACCACANN
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CTCATGGGAAGCACAT---
--------AAGGATATNTN
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTCATGGGAAGCACAT--
-NCTANGTCAGCAAATTT
 A G T C C G A T A G T C C G T A A G C T C T A G T A C G A C T G C G T A C G T A A C T G A G T C C G T A A G T C C G T A C G A T A C G T A C G T
A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T