p-value: | 1e-6 |
log p-value: | -1.580e+01 |
Information Content per bp: | 1.949 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.7 +/- 20.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT TGACCTTGACCT- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT ------TGACCT- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT TGACCTTGACCT- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT- ------TGACCYCT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT----- --NNNNTGACCCGGCGCG |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT----- --NNNNTGACCTTTNNNN |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT-- -----CTGACCTTTG |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT----- --NNCNTGACCCCGCTCT |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT-- --CNNTTGACCTTTG |
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RORA/MA0071.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTACCCTGACCCT--- ------TGACCTTGAT |
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