Information for 12-TAGGGTCATGCAYGGA (Motif 21)

A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C T A G A C G T A C T G A G T C C G T A A C G T A T C G G T C A A G T C A G T C A G T C A C G T C G T A
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 23.1bp
Average Position of motif in Background36.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGGGTCATGCAYGGA---
---NGTCACGCTTGGCTGC
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TAGGGTCATGCAYGGA
AGAGCGGGGTCAAGTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TAGGGTCATGCAYGGA
----GTCATN------
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGGGTCATGCAYGGA
--AGGTCA--------
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TAGGGTCATGCAYGGA
CGCGCCGGGTCACGTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGTCATGCAYGGA
NTNNNGGGGTCANGNNN---
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TAGGGTCATGCAYGGA
TRAGGTCA--------
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TAGGGTCATGCAYGGA--
---GGTCANYTGAGGWCA
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGGGTCATGCAYGGA
AGRGGTCA--------
 A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGTCATGCAYGGA
NRRGGGTCTT-------
 A C G T A C G T C G T A C T A G C T A G A C T G A C G T A T G C G T C A A C G T A C T G A G T C G T C A G A C T A C T G A C T G C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T