Information for 9-GGACAACTCCCTG (Motif 17)

A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C T G C T G A C T A G A C G T A C G T A C T G A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 19.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGACAACTCCCTG---
-GACCACGCCCTTATT
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGACAACTCCCTG
ACTACAATTCCC--
 A C G T A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGACAACTCCCTG
GGGAAATCCCCN-
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGACAACTCCCTG-
--ACCACATCCTGT
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGACAACTCCCTG--
-----ACTTCCTGTT
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGACAACTCCCTG-
----CACTTCCTGT
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GGACAACTCCCTG
NNNNNGAACAATTGANN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGACAACTCCCTG--
-----ATTTCCTGTN
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGACAACTCCCTG--
-----ACTTCCTGNT
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGACAACTCCCTG
GGACCACCCACG-
 A C T G A C T G C G T A A G T C C G T A C G T A A G T C A G C T A G T C G T A C A G T C A C G T A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T