Information for 8-CMCRCCAKSCAAC (Motif 16)

A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A T C G T G C A A C G T A C T G A C T G A G T C A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 18.5bp
Average Position of motif in Background73.4 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CMCRCCAKSCAAC
ATCACCCCAT-----
 A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CMCRCCAKSCAAC-
TACCCACAATGCATTG
 A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CMCRCCAKSCAAC
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CMCRCCAKSCAAC
ATCACCCCAT-----
 A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CMCRCCAKSCAAC
CNGTCACGCCAC-----
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CMCRCCAKSCAAC--------
-CCCCAAACCACCCCCCCCCA
 A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CMCRCCAKSCAAC
ATCACCCCAC-----
 A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CMCRCCAKSCAAC--
---SCCTAGCAACAG
 A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CMCRCCAKSCAAC
----BCAGACWA-
 A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CMCRCCAKSCAAC
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C T A G A G T C A G T C C G T A A C G T A T G C A G T C C G T A C G T A A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T