Information for 17-GAATAGTGTG (Motif 43)

A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T A C G T A G T C
p-value:1e-1
log p-value:-3.443e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 28.9bp
Average Position of motif in Background78.6 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)7.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAATAGTGTG-----
NNNNTTGTGTGCTTNN
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAATAGTGTG
CCAAAAATAG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAATAGTGTG--
--ATGGGGTGAT
 A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAATAGTGTG--------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAATAGTGTG
ATGAATATTC--
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAATAGTGTG-----
GAACADWATGTTCTT
 A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAATAGTGTG-----
NNGCGTGTGTGCNGCN
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GAATAGTGTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAATAGTGTG--
--AAGGTGTGAA
 A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAATAGTGTG---
AAAATTGTTATGAA
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A