Information for 7-ATGGTAGGGA (Motif 25)

C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C G T A C A C G T C G T A A G T C A G T C C T G A A C G T
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.4 +/- 27.1bp
Average Position of motif in Background53.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATGGTAGGGA---
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGGTAGGGA-
CAGGTAAGTAT
 C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGGTAGGGA----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------ATGGTAGGGA
GANTATTATGGGATGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATGGTAGGGA---
--GGGCGGGAAGG
 C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGGTAGGGA---
CCATTGTATGCAAAT
 A C G T A C G T C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATGGTAGGGA--
--GGGCGGGACC
 C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGGTAGGGA
NTGGAATGTG
 C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATGGTAGGGA---
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGGTAGGGA
-TGGAATGT-
 C G T A A G C T A C T G A C T G A C G T G T C A A C T G A C T G A C T G C G T A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T