Information for 11-TTTACNGTAGTAAAGG (Motif 21)

A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
Reverse Opposite:
A G T C A T G C C A G T A C G T A C G T T C G A A G T C A C G T C G T A G A T C C G T A A C T G A C G T C G T A C G T A T C G A
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.754
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 31.6bp
Average Position of motif in Background64.3 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX5/MA0510.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTACNGTAGTAAAGG
NGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTACNGTAGTAAAGG
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTACNGTAGTAAAGG-
--TACCATAGCAACGGT
 A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G A C G T
A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTACNGTAGTAAAGG-
--CCGCATAGCAACGGA
 A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTACNGTAGTAAAGG
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

RFX2/MA0600.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTACNGTAGTAAAGG
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G A C G T

RFX3/MA0798.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTACNGTAGTAAAGG
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTACNGTAGTAAAGG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTACNGTAGTAAAGG
GGTTGCCATGGCAA---
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTTACNGTAGTAAAGG
CGTTGCCATGGCAACN-
 A C G T A C G T A C G T A C G T C G T A T A G C A C G T C T A G A C G T C G T A A C T G A C G T C G T A C G T A G C T A A T C G C T A G
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G A C G T