Motif 2

Information for 1-TCACCACCCCTTC (Motif 2)

Reverse Opposite:

p-value:	1e-11
log p-value:	-2.576e+01
Information Content per bp:	1.899
Number of Target Sequences with motif	7.0
Percentage of Target Sequences with motif	1.38%
Number of Background Sequences with motif	8.3
Percentage of Background Sequences with motif	0.02%
Average Position of motif in Targets	41.6 +/- 28.8bp
Average Position of motif in Background	26.1 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)	2.8
Multiplicity (# of sites on avg that occur together)	1.14
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	1
Score:	0.69
Offset:	-1
Orientation:	forward strand
Alignment:	-TCACCACCCCTTC-- ATCCCCGCCCCTAAAA

KLF5/MA0599.1/Jaspar

Match Rank:	2
Score:	0.65
Offset:	0
Orientation:	forward strand
Alignment:	TCACCACCCCTTC GCCCCGCCCC---

SP1/MA0079.3/Jaspar

Match Rank:	3
Score:	0.64
Offset:	0
Orientation:	forward strand
Alignment:	TCACCACCCCTTC GCCCCGCCCCC--

POL003.1_GC-box/Jaspar

Match Rank:	4
Score:	0.63
Offset:	-2
Orientation:	reverse strand
Alignment:	--TCACCACCCCTTC NAGCCCCGCCCCCN-

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:	5
Score:	0.63
Offset:	-2
Orientation:	forward strand
Alignment:	--TCACCACCCCTTC NRGCCCCRCCCHBNN

EGR1/MA0162.2/Jaspar

Match Rank:	6
Score:	0.63
Offset:	0
Orientation:	forward strand
Alignment:	TCACCACCCCTTC- CCCCCGCCCCCGCC

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:	7
Score:	0.61
Offset:	3
Orientation:	reverse strand
Alignment:	TCACCACCCCTTC ---TTCCCCCTAC

SP2/MA0516.1/Jaspar

Match Rank:	8
Score:	0.60
Offset:	0
Orientation:	forward strand
Alignment:	TCACCACCCCTTC-- GCCCCGCCCCCTCCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:	9
Score:	0.60
Offset:	-2
Orientation:	forward strand
Alignment:	--TCACCACCCCTTC-- TCACCCCGCCCCAAATT

Klf4/MA0039.2/Jaspar

Match Rank:	10
Score:	0.60
Offset:	0
Orientation:	reverse strand
Alignment:	TCACCACCCCTTC GCCCCACCCA---