Information for 5-AGGARRMCCTGCW (Motif 7)

C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A T C G A C T G A G C T A G C T A C G T A G T C A G T C A C G T
p-value:1e-12
log p-value:-2.770e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 8.9bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGARRMCCTGCW-
--SNGCACCTGCHS
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGGARRMCCTGCW
NDCAGGAARTNN----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGARRMCCTGCW
----NCACCTGTN
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGARRMCCTGCW----
--GGCCYCCTGCTGDGH
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGARRMCCTGCW---
----CCCCCTGCTGTG
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGARRMCCTGCW
AVCAGGAAGT------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGGARRMCCTGCW
---AACACCTGCT
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGARRMCCTGCW
-GGAAANCCCC--
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGGARRMCCTGCW----
-------CCTGCTGAGH
 C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGARRMCCTGCW
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T G A G T A C A T G C A G T C C G A T A C T G A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T