Information for 2-GGAAGCCTGT (Motif 5)

A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
Reverse Opposite:
C T G A A G T C C G T A A C T G A T C G A G T C A C G T A G C T A G T C G T A C
p-value:1e-12
log p-value:-2.832e+01
Information Content per bp:1.846
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif76.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets59.0 +/- 22.7bp
Average Position of motif in Background48.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GGAAGCCTGT-
-----GCTGTG
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGCCTGT----
GGNGCGNCTGTTNNN
 A C G T A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAAGCCTGT
NGAAGC----
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAAGCCTGT
--AAGCTTG-
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGAAGCCTGT
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAAGCCTGT
CGGAGC----
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGAAGCCTGT---
-----GCTGTCAA
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAAGCCTGT
--CAGCC---
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGAAGCCTGT
--TWGTCTGV
 A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAAGCCTGT
ACCGGAAG-----
 A C G T A C G T A C G T A C T G T C A G T C G A C G T A C T A G A T G C A G T C A C G T A C T G G A C T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T