Information for 1-CCTGGTCTCCTATCAC (Motif 3)

A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G G C T A G C A T G T C A C T A G C T A G G C T A T A C G C G T A A G T C G A T C T C G A A C T G A C T G
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets72.1 +/- 20.8bp
Average Position of motif in Background55.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0021.1_Gata3_1/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGGTCTCCTATCAC------
NNTNANTTCTTATCTCTANANN
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCTGGTCTCCTATCAC---
CCTTTACCCTTCTTCACCTT
 A C G T A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C A C G T A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGGTCTCCTATCAC
TCTTATCTCCC-----
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCTGGTCTCCTATCAC
GAGCCCTTGTCCCTAA----
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CCTGGTCTCCTATCAC--
----------AGTCACGC
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CCTGGTCTCCTATCAC----
----------GGTCACGTGG
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCTGGTCTCCTATCAC
TTCTTATCTGT------
 A C G T A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.48
Offset:12
Orientation:forward strand
Alignment:CCTGGTCTCCTATCAC----
------------TCAGTCTT
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGTCTCCTATCAC
NCCTTATCTG-------
 A C G T A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CCTGGTCTCCTATCAC
--CAGTTTCGNTTCTN
 A G T C A G T C A C G T C T A G T C A G A C G T A T G C C A G T A G T C G A T C A C G T C G T A C A G T A G T C C G T A A G T C
A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C