Information for 11-CGTATTTTTC (Motif 23)

A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A G T C A C G T A C G T A C G T A G C A T C G T A A T G C C T A G
p-value:1e-7
log p-value:-1.803e+01
Information Content per bp:1.853
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.0 +/- 24.4bp
Average Position of motif in Background54.0 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CGTATTTTTC-
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTATTTTTC-----
-TTTTTTTTCNNGTN
 A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTATTTTTC-----
AATCAATTGTTCCGCTA
 A C G T A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTATTTTTC-----
NNNNTTTTTTTTTNAAC
 A C G T A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTATTTTTC----
TTCTATTTTTAGNNN
 A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CGTATTTTTC--
-----TTTTCCA
 A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTATTTTTC--
KCTATTTTTRGH
 A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTATTTTTC----
NNTTTATTGTTCTNNN
 A C G T A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGTATTTTTC----
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTATTTTTC
-GTTTGTT--
 A G T C A T C G C G A T C G T A C G A T A C G T A C G T A C G T A G C T A G T C
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T