Information for 14-GGCWGGAYTTAAA (Motif 21)

A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
Reverse Opposite:
C G A T A C G T A C G T T C G A C G T A C T A G A G C T A G T C A G T C C G T A A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.910
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.0 +/- 24.9bp
Average Position of motif in Background48.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGCWGGAYTTAAA-
-----NATTCAAAT
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCWGGAYTTAAA
---CGGTTTCAAA
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCWGGAYTTAAA
----GCACTTAA-
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGCWGGAYTTAAA
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCWGGAYTTAAA
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCWGGAYTTAAA
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCWGGAYTTAAA
---NGGGATTA--
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCWGGAYTTAAA-
----GCAATAAAAA
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCWGGAYTTAAA----
ACAAGCAATTAATGAAT
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCWGGAYTTAAA----
ACAAGCAATTAATGAAT
 A C T G A C T G A G T C C G A T A C T G A C T G C T G A A G T C A C G T A C G T C G T A G T C A C G T A A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T